Publications

Multiplex, single-cell CRISPRa screening for cell type specific regulatory elements.

Chardon FM, McDiarmid TA, Page NF, Daza RM, Martin BK, Domcke S, Regalado SG, Lalanne JB, Calderon D, Li X, Starita LM, Sanders SJ, Ahituv N, Shendure J

2024
The polymyxin-B direct hemoperfusion OPTimal Initiation timing with Catecholamine PMX-OPTIC study: A multicenter retrospective observational study.

Nakamura K, Okazaki T, Tampo A, Mochizuki K, Kanda N, Ono T, Yanagita K, Shimomura T, Murase T, Saito K, Hirayama T, Ito T, Ogawa K, Nakamura M, Oda T, Morishima T, Fukushima T, Yasui H, Akashi N, Oshima K, Kawarazaki H, Akiba T, Uemura S, Honma Y, Nitta K, Okamoto K, Takaki S, Takeda H, Yamashita C

2024
Endogenous opioid signalling regulates spinal ependymal cell proliferation.

Yue WWS, Touhara KK, Toma K, Duan X, Julius D

2024
Cross-disorder and disease-specific pathways in dementia revealed by single-cell genomics.

Rexach JE, Cheng Y, Chen L, Polioudakis D, Lin LC, Mitri V, Elkins A, Han X, Yamakawa M, Yin A, Calini D, Kawaguchi R, Ou J, Huang J, Williams C, Robinson J, Gaus SE, Spina S, Lee EB, Grinberg LT, Vinters H, Trojanowski JQ, Seeley WW, Malhotra D, Geschwind DH

2024
Retinal Input to Macaque Superior Colliculus Derives from Branching Axons Projecting to the Lateral Geniculate Nucleus.

Zheng YJ, Adams DL, Gentry TN, Dilbeck MD, Economides JR, Horton JC

2024
Correction: Identifying dysfunctional cell types and circuits in animal models for psychiatric disorders with calcium imaging.

Gergues MM, Lalani LK, Kheirbek MA

2024
Antigen-specificity of clonally-enriched CD8+ T cells in multiple sclerosis.

Mittl K, Hayashi F, Dandekar R, Schubert RD, Gerdts J, Oshiro L, Loudermilk R, Greenfield A, Augusto DG, Ramesh A, Tran E, Koshal K, Kizer K, Dreux J, Cagalingan A, Schustek F, Flood L, Moore T, Kirkemo LL, Cooper T, Harms M, Gomez R, University of California, San Francisco MS-EPIC Team, Sibener L, Cree BAC, Hauser SL, Hollenbach JA, Gee M, Wilson MR, Zamvil SS, Sabatino JJ

2024
pyPAGE: A framework for Addressing biases in gene-set enrichment analysis-A case study on Alzheimer's disease.

Bakulin A, Teyssier NB, Kampmann M, Khoroshkin M, Goodarzi H

2024
Receptive-field nonlinearities in primary auditory cortex: a comparative perspective.

Homma NY, See JZ, Atencio CA, Hu C, Downer JD, Beitel RE, Cheung SW, Najafabadi MS, Olsen T, Bigelow J, Hasenstaub AR, Malone BJ, Schreiner CE

2024
Unsupervised pattern identification in spatial gene expression atlas reveals mouse brain regions beyond established ontology.

Cahill R, Wang Y, Xian RP, Lee AJ, Zeng H, Yu B, Tasic B, Abbasi-Asl R

2024

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